Survival-associated eQTLs across different cancer types
We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
log-rank test p-value
|
Sample size
|
Median survival time AA
|
Median survival time Aa
|
Median survival time aa
|
|
---|---|---|---|---|---|---|---|---|---|
KIRP | rs140782363 | chr17:80736078 | C/T | 9.94E-5 | 208 | 15.88 | 17.6 | 15.15 | KM Plot |
KIRP | rs141013201 | chr6:27883077 | T/TTATATA | 5.53E-7 | 212 | 16.43 | 15.02 | 9.77 | KM Plot |
KIRP | rs141078206 | chr19:42587193 | AAAAC/A | 0.00036 | 211 | 14.87 | 17 | 11.2 | KM Plot |
KIRP | rs141145974 | chr17:80838803 | C/CCTTCCA | 0.000108 | 210 | 15.88 | 15.07 | 13.17 | KM Plot |
KIRP | rs141192417 | chr1:48782008 | T/C | 3.49E-7 | 213 | 14.85 | 19.87 | 11.03 | KM Plot |
KIRP | rs141342723 | chr6:27622084 | T/C | 1.98E-7 | 213 | 16.45 | 15.02 | 9.77 | KM Plot |
KIRP | rs141603244 | chr14:59994411 | GTACATA/G | 0.000205 | 213 | 16.43 | 18 | 11.2 | KM Plot |
KIRP | rs141718528 | chr10:63474842 | G/A | 0 | 213 | 18.03 | 6.2 | 3.38 | KM Plot |
KIRP | rs141939246 | chr10:63473301 | C/T | 0 | 214 | 18.02 | 6.2 | 3.38 | KM Plot |
KIRP | rs142257165 | chr6:26357898 | C/CT | 3.08E-7 | 214 | 16.5 | 13.17 | 9.77 | KM Plot |
KIRP | rs142326907 | chr1:89455994 | CTT/C | 3.53E-5 | 206 | 17 | 15.9 | 10.23 | KM Plot |
KIRP | rs1424516 | chr2:86395273 | C/T | 2.16E-6 | 214 | 16.53 | 14.32 | 11.43 | KM Plot |
KIRP | rs142548572 | chr17:80735801 | C/T | 3.17E-5 | 205 | 15.88 | 17.2 | 15.15 | KM Plot |
KIRP | rs142598513 | chr4:70329430 | GTAAA/G | 5.25E-7 | 205 | 15.88 | 14.53 | 10.63 | KM Plot |
KIRP | rs142766897 | chr6:27619691 | C/CA | 1.98E-7 | 213 | 16.45 | 15.02 | 9.77 | KM Plot |